Start by cutting the chilies. Layer half of the cut chilies in the bottom of a prepared casserole dish. Sprinkle with half the cheeses. Then, layer with the other half of the cut chilies and the remaining cheeses.
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Whisk together the eggs, milk, flour, baking powder, salt, and black pepper.
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Pour the egg mixture over the cheese and green chilies. Bake and let cool, then serve with toppings.
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